PubMan Func Spec Submission/PubMed Central Mapping
Revision as of 09:20, 24 November 2008 by Kleinfercher (talk | contribs) (→PubMed Central - PubMan Mapping)
PubMed Central - PubMan Mapping[edit]
This mapping is related to the Journal Archiving and Interchange Tag Set Tag Library version 2.3
Mapping[edit]
| PubMed Central Element | PubMan Metadata Set | Occurrence | Attribute | Description |
|---|---|---|---|---|
| article | Publication set type="article" and Publication.Source set type="journal" |
once | -- | Root envelope |
| front | -- | once | The metadata for an article | |
| journal-meta | -- | zero or once | Wrapper: Metadata that identifies the journal | |
| journal-id | if journal-id-type= issn: Publication.Source.Identifier set Type="eidt:ISSN" if journal-id-type= doi: Publication.Source.Identifier set Type="dcterms:DOI" else: Publication.Source.Identifier set Type="other ???" |
once | journal-id-type | identifier for the journal |
| journal-title | Publication.Source.Title | zero or many | The title of the journal | |
| journal-subtitle | Publication.Source.AlternativeTitle | zero or many | The subtitle of the journal | |
| trans-title | Publication.Source.AlternativeTitle | zero or many | content-type, id, xml:lang | An alternative version of an article title that has been translated into a language other than that of the original article title |
| trans-subtitle | Publication.Source.AlternativeTitle | zero or many | content-type, id, xml:lang | An alternative version of an article subtitle that has been translated into a language other than that of the original article subtitle |
| abbrev-journal-title | Publication.Source.AlternativeTitle | zero or many | abbrev-type | A short form of the title of the journal |
| issn | Publication.Source.Identifier set Type="eidt:ISSN" | zero or many | International Standard Series Number | |
| publisher | -- | zero or once | Wrapper: Information about the person, company, or other entity which published a work | |
| publisher-name | Publication.Source.PublishingInfo.Publisher | once | ||
| publisher-loc | Publication.Source.PublishingInfo.Place | zero or once | ||
| notes | -- | zero or once | id, notes-type | |
| custom-meta-wrap | -- | zero or once | Wrapper: Some Tag Sets allow for metadata above and beyond that which can be specified by this Tag Set. This element is a wrapper element used to contain all these additional metadata elements. | |
| article-meta | -- | once | Wrapper: Metadata that identifies the article | |
| article-id | if pub-id-type= issn: Publication.Identifier set Type="ISSN" if pub-id-type= doi: Publication.Identifier set Type="dcterms:DOI" else: Publication.Identifier set Type="other ???" |
zero or many | pub-id-type | |
| article-categories | -- | zero or once | Wrapper | |
| subj-group | -- | zero or many | subj-group-type, xml:lang | Wrapper: Subject matter designations describing an article’s content |
| subject | Publication.Subject | once or many | content-type | Name of one subject |
| subj-group | -- | zero or many | subj-group-type, xml:lang | Wrapper: Subject matter designations describing an article’s content |
| series-title | -- | zero or many | content-type | Title of the journal series |
| series-text | -- | zero or once | content-type | Textual description of the series |
| article-categories | -- | zero or once | Wrapper | |
| title-group | -- | zero or once | Wrapper | |
| article-title | Publication.Title | once | id, xml:lang | The full title of a article |
| subtitle | Publication.AlternativeTitle | zero or many | content-type, xml:lang | The subtitle of a article |
| trans-title | Publication.AlternativeTitle | zero or many | content-type, id, xml:lang | An alternative version of an article title that has been translated into a language other than that of the original article title |
| trans-subtitle | Publication.AlternativeTitle | zero or many | content-type, id, xml:lang | An alternative version of an article subtitle that has been translated into a language other than that of the original article subtitle |
| alt-title | Publication.AlternativeTitle | zero or many | alt-title-type | An alternative or “different” version of an article title |
| fn-group | -- | zero or once | content-type, id | Wrapper |
| title | -- | zero or once | content-type, id | footnote title |
| fn | -- | once or many | fn-type, id, symbol, xml:lang | footnote value |
| contributer-group | -- | once | content-type, id | Wrapper |
| contrib | creatortype = person if contrib-type=author or Author Publication.Creator set role = "Author" if contrib-type= editor or Editor Publication.Creator set role = "Editor" else: Publication.Creator set role = "Contributer" |
once or many | contrib-type, corresp, deceased, equal-contrib, id, rid, xlink:actuate, xlink:href, xlink:role, xlink:show, xlink:title, xlink:type, xmlns:xlink | Wrapper element to contain the information about a single contributor |
| name | -- | zero or many | content-type, name-style | Wrapper: Contributer name |
| surname | Publication.Creator.Person.FamilyName | once | initials | The surname of a person |
| given-names | Publication.Creator.Person.GivenName | zero or once | initials | The surname of a person |
| aff | Publication.Creator.Person.Organization.Name | once | content-type, id, rid | the affiliation for a contributor |
| addr-line | Publication.Creator.Person.Organization.Adress | zero or once | content-type | An address |
| author-notes | -- | zero or once | id, rid | Collection of notes about authors |
| pub-date | Publication.Date if pub-type= epub: DateType = published online if pub-type= ppub: DateType = published in print, if pub-type= epub-ppub: DateType = published online & published in print if pub-type=ecorrected: DateType = modified if pub-type= pcorrected: DateType = modified |
zero or many | pub-type (epub, ppub, epub-ppub, epreprint, ppreprint, ecorrected, pcorrected, eretracted, pretracted) | Date this article was published or released in one particular format |
| volume | Publication.Source.Volume | zero or once | content-type, seq | Number of a journal within a series |
| volume-id | -- | zero or many | content-type, pub-id-type | Used to record a name or an identifier, such as a DOI, that describes an entire volume of a journal (source of source) |
| issue | Publication.Source.Issue | zero or once | content-type, seq | The issue number of a journal |
| issue-id | If new Source Issue created, then Publication.Source(2).Identifier = issue-id, type = mapping like journal-id type |
zero or many | content-type, pub-id-type | Used to record a name or identifier, such as a DOI, that describes an entire issue of a journal |
| issue-title | Create new Source with type Issue Publication.Source(2).Title = issue-title |
zero or many | content-type | Used to record the theme or special issue title for an issue of the journal (source of source) |
| supplement | -- | zero or once | supplement-type (issue, conference, periodic, --) | Wrapper |
| -- | zero or many | ... | ||
| ext-link | locator of supplementary material | zero or many | ...xlink:href, xlink:title... | Link to an external file |
| self-uri | locator of article | zero or many | ... | The textual content of this element may be a URI |
| inline-supplementary-material | -- | zero or many | ... | An in-text link to an external file |
| related-article | -- | zero or many | ... | Wrapper element, used as a container for text links to a related article |
| fpage | Publication.Source.StartPage | zero or once | content-type, seq | The page number on which an article starts |
| lpage | Publication.Source.EndPage | zero or once | content-type | The page number on which the article ends |
| page-range | TotalNumberOfPages | zero or once | content-type | A container element for additional page information to record discontinuous pages ranges |
| elocation-id | Publication.Source.SequenceNumber | zero or once | content-type, seq | Page identifier for an article that does not have traditional page numbers |
| abstract | Publication.Abstract | zero or once | abstract-type, id, xml:lang | |
| trans-abstract | Publication.Abstract | zero or once | abstract-type, id, xml:lang | |
| kwd-group | -- | zero or many | kwd-group-type, id, xml:lang | Wrapper: For one set of keywords |
| title | -- | zero or once | content-type, id | |
| kwd | Publication.Subject | once or many | id | |
| conference | -- | zero or many | Wrapper: Conference | |
| conf-date | Publication.Event.StartDate | zero or many | content-type | |
| conf-name | Publication.Event.Title | zero or many | content-type | |
| conf-num | Add to Publication.Event.Title | zero or many | content-type | |
| conf-loc | Publication.Event.Place | zero or many | content-type | |
| conf-sponsor | -- | zero or many | content-type | |
| conf-theme | Publication.Subject | zero or many | content-type | |
| conf-acronym | Publication.Event.AlternativeTitle | zero or many | ||
| body | -- | zero or once | -- | The main textual portion of the article |
| back | -- | zero or once | -- | Ancillary or supporting material that is not included as part of the main textual content |
| floats-wrap | -- | zero or once | -- | A wrapper element to hold the floating objects (figures, tables, text boxes, graphics, etc.) |
Annotations[edit]
- The abstract element can contain markup which we have to parse out
- The eSciDoc Identifier type list will be enhanced with PMC and PMID